Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs13141793 chr4:57247862 A/G 1.33E-5 174 32.2 21.6 18.88 KM Plot
UCEC rs13147824 chr4:57297996 C/T 0.000131 171 32.2 22.7 19.17 KM Plot
UCEC rs13153019 chr5:176782218 T/C 4.92E-10 169 21.35 26.37 14.63 KM Plot
UCEC rs13275737 chr8:66568617 T/G 1.26E-11 172 4.33 22.7 22.6 KM Plot
UCEC rs13299707 chr9:19205682 T/A 1.93E-5 166 21.5 28.18 16.57 KM Plot
UCEC rs13354729 chr5:54457756 A/G 4.59E-10 171 21.55 24.07 20.33 KM Plot
UCEC rs13356730 chr5:54457711 G/A 4.59E-10 171 21.55 24.07 20.33 KM Plot
UCEC rs13359463 chr5:54426473 C/T 2.79E-7 173 21.55 24.07 20.33 KM Plot
UCEC rs13403010 chr2:26435127 T/C 6.83E-6 171 22.9 17.2 11.53 KM Plot
UCEC rs13437852 chr7:64113716 C/A 0 174 22.57 21.98 2.4 KM Plot
UCEC rs138039544 chr3:47819471 G/A 6.44E-6 174 22.63 20.13 11.53 KM Plot
UCEC rs138523768 chr7:64177876 A/G 0 174 22.57 21.98 2.4 KM Plot
UCEC rs138826 chr22:50172037 A/G 3.28E-6 171 22.7 20.1 14.4 KM Plot
UCEC rs138827 chr22:50172281 T/C 3.11E-6 172 22.67 20.1 14.4 KM Plot
UCEC rs139021949 chr14:77875842 C/T 2.32E-10 172 21.5 29.5 8.32 KM Plot